{"id":31505,"date":"2024-01-25T13:51:10","date_gmt":"2024-01-25T12:51:10","guid":{"rendered":"https:\/\/carpem.stage.spacerdesign.com\/platforms\/recherche-translationnelle\/"},"modified":"2024-01-25T13:51:10","modified_gmt":"2024-01-25T12:51:10","slug":"recherche-translationnelle","status":"publish","type":"page","link":"https:\/\/carpem.stage.spacerdesign.com\/en\/platforms\/recherche-translationnelle\/","title":{"rendered":"Recherche Translationnelle"},"content":{"rendered":"<div class=\"wpb-content-wrapper\"><p>[vc_row equal_height=&#8221;yes&#8221;][vc_column][vc_column_text]<\/p>\n<h5 class=\"elementor-heading-title elementor-size-default\" style=\"text-align: center;\">Plateforme de bases de donn\u00e9es<\/h5>\n<p>[\/vc_column_text][\/vc_column][\/vc_row][vc_row equal_height=&#8221;yes&#8221; css=&#8221;.vc_custom_1553263700649{margin-top: 20px !important;margin-bottom: 50px !important;}&#8221;][vc_column width=&#8221;1\/2&#8243; css_animation=&#8221;fadeIn&#8221; css=&#8221;.vc_custom_1550402513882{padding-top: 0px !important;background-position: center !important;background-repeat: no-repeat !important;background-size: cover !important;}&#8221;]<div class=\"clearboth\"><\/div><style>#thegem-divider-69ef17e2e3f12 {margin-top: 50px !important;}<\/style><div id=\"thegem-divider-69ef17e2e3f12\" class=\"gem-divider  divider-hidden\" style=\"\" ><\/div>[vc_single_image image=&#8221;31056&#8243; img_size=&#8221;full&#8221;]<div class=\"clearboth\"><\/div><style>#thegem-divider-69ef17e2e3f5b {margin-top: 100px !important;}<\/style><div id=\"thegem-divider-69ef17e2e3f5b\" class=\"gem-divider  divider-hidden\" style=\"\" ><\/div>[\/vc_column][vc_column width=&#8221;1\/2&#8243;]<div class=\"clearboth\"><\/div><style>#thegem-divider-69ef17e2e3f8c {margin-top: 45px !important;}<\/style><div id=\"thegem-divider-69ef17e2e3f8c\" class=\"gem-divider  divider-hidden\" style=\"\" ><\/div>[vc_column_text css=&#8221;.vc_custom_1698237155821{margin-top: -10px !important;padding-top: 20px !important;}&#8221;]Les buts du Syst\u00e8me d\u2019Information (SI) d\u00e9ploy\u00e9 pour CARPEM sont :<\/p>\n<ol>\n<li>de faciliter l\u2019exploration des donn\u00e9es et l\u2019identification de pistes de recherche,<\/li>\n<li>de regrouper dans un m\u00eame entrep\u00f4t toutes les donn\u00e9es pertinentes pour la recherche,<\/li>\n<li>de permettre l\u2019enrichissement des donn\u00e9es par croisement des informations avec d\u2019autres sources, et<\/li>\n<li>de standardiser la repr\u00e9sentation de ces donn\u00e9es.<\/li>\n<\/ol>\n<p>L\u2019entrep\u00f4t de recherche translationnelle tranSMART, interface visible du SI pour les chercheurs contiendra des donn\u00e9es anonymis\u00e9es. tranSMART est un entrep\u00f4t de recherche translationnelle issue de l\u2019industrie pharmaceutique et rendu open-source. Il permet une exploration facilit\u00e9e des donn\u00e9es, et b\u00e9n\u00e9ficie de la grande dynamique de sa communaut\u00e9 d\u2019utilisateurs.[\/vc_column_text][\/vc_column][\/vc_row][vc_row][vc_column][vc_column_text]<\/p>\n<h5>DONN\u00c9ES COLLECT\u00c9ES<\/h5>\n<p>&nbsp;<\/p>\n<p>Les sources d\u2019information du projet CARPEM sont les bases r\u00e9trospectives collect\u00e9es par les \u00e9quipes pr\u00e9alablement au lancement du projet. Les donn\u00e9es collect\u00e9es dans les \u00e9quipes doivent faire l\u2019objet d\u2019une standardisation avant de pouvoir \u00eatre int\u00e9gr\u00e9es au SI CAPREM. Il s\u2019agit de permettre la compatibilit\u00e9 du format des bases avec les diff\u00e9rents outils de traitement et d\u2019exploration de l\u2019information, et de raisonnablement harmoniser les contenus.<\/p>\n<ul>\n<li>les bases prospectives. La cr\u00e9ation de ces bases va n\u00e9cessiter de r\u00e9pondre \u00e0 diverses questions scientifiques mais aussi techniques comme quelles donn\u00e9es r\u00e9colter ? comment r\u00e9colter, o\u00f9 et \u00e0 quel moment aller chercher l\u2019information ?<\/li>\n<\/ul>\n<p>Les bases r\u00e9trospectives et prospectives sont cr\u00e9\u00e9es en fonction des localisations tumorales. Afin d\u2019avancer au plus vite dans la mise en place de SI mutualis\u00e9 aux 2 sites hospitaliers Cochin\/ HEGP, des groupes de travail multidisciplinaires par localisation tumorale ont \u00e9t\u00e9 mis en place.[\/vc_column_text]<div class=\"clearboth\"><\/div><style>#thegem-divider-69ef17e2e3fb6 {margin-top: 100px !important;}<\/style><div id=\"thegem-divider-69ef17e2e3fb6\" class=\"gem-divider  divider-hidden\" style=\"\" ><\/div>[vc_column_text]<\/p>\n<h5>INT\u00c9GRATION DES DONN\u00c9ES CARPEM<\/h5>\n<p>&nbsp;<\/p>\n<p>L\u2019un des buts du SI est de permettre l\u2019enrichissement des donn\u00e9es de recherche par des donn\u00e9es cliniques. Pour atteindre cet objectif, il faut pouvoir identifier pour un patient l\u2019ensemble des documents qui lui corresponde. Cette t\u00e2che sera effectu\u00e9e dans CARPEM par un serveur de f\u00e9d\u00e9ration d\u2019identit\u00e9.<\/p>\n<p>Nous utiliserons une m\u00e9thode inspir\u00e9e par les travaux de St. Sauver et al. du Rochester Epidemiology Project (un projet d\u2019int\u00e9gration de plus d\u2019un million de documents cliniques sur 30 ans), et guid\u00e9 par les exp\u00e9riences pr\u00e9alables de notre \u00e9quipe sur des probl\u00e8mes similaires. La m\u00e9thode fait appel \u00e0 une succession de r\u00e8gles de la plus solide \u00e0 la plus fragile pour identifier que des documents appartiennent \u00e0 un m\u00eame patient. Par exemple une des premi\u00e8res r\u00e8gles pourrait-\u00eatre : si le nom, le pr\u00e9nom, la date de naissance et lieux de naissance sont identiques alors les deux dossiers sont attribu\u00e9s \u00e0 la m\u00eame personne. La m\u00e9thode est relativement simple, son application soul\u00e8ve de nombreux probl\u00e8mes de r\u00e9glages.[\/vc_column_text]<div class=\"clearboth\"><\/div><style>#thegem-divider-69ef17e2e3fe1 {margin-top: 100px !important;}<\/style><div id=\"thegem-divider-69ef17e2e3fe1\" class=\"gem-divider  divider-hidden\" style=\"\" ><\/div>[vc_column_text]<\/p>\n<h5>ARCHITECTURE ET OUTILS D\u00c9PLOY\u00c9S<\/h5>\n<p>&nbsp;<\/p>\n<p>Le SI est organis\u00e9 en trois couches :<\/p>\n<ol>\n<li>La couche \u00ab Int\u00e9gration des donn\u00e9es \u00bb. Son acc\u00e8s est restreint \u00e0 l\u2019\u00e9quipe d\u2019informatique m\u00e9dicale et ne correspond qu\u2019aux t\u00e2ches de f\u00e9d\u00e9ration d\u2019identit\u00e9 et des standardisations des diff\u00e9rentes sources de donn\u00e9es. C\u2019est l\u00e0 que les donn\u00e9es nominatives sont trait\u00e9es.<\/li>\n<li>La couche \u00ab interne AP-HP \u00bb. Elle permet aux chercheurs et aux personnels du projet CARPEM d\u2019acc\u00e9der aux outils tel que l\u2019eCRF au sein du r\u00e9seau APHP.<\/li>\n<li>La couche \u00ab ext\u00e9rieure \u00bb. Qui permettra selon des modalit\u00e9s \u00e0 d\u00e9finir, d\u2019acc\u00e9der \u00e0 l\u2019entrep\u00f4t de recherche translationnelle tranSMART \u00e0 l\u2019ensemble des chercheurs du projet CARPEM (aussi bien APHP, que hors APHP). Cette couche ne contient que des donn\u00e9es anonymis\u00e9es.<\/li>\n<\/ol>\n<p>L\u2019ensemble des outils seront d\u00e9ploy\u00e9s sur des serveurs d\u00e9di\u00e9s et b\u00e9n\u00e9ficiant des protections techniques de l\u2019HEGP et de l\u2019AP-HP.<\/p>\n<p>Les outils d\u00e9ploy\u00e9s sont :<\/p>\n<ul>\n<li>tranSMART,<\/li>\n<li>REDCap : eCRF utilis\u00e9 par plus de 700 institutions dans 60 pays du monde et g\u00e9rant plus de 80 000 projets.<\/li>\n<li>Serveur de f\u00e9d\u00e9ration d\u2019identit\u00e9, d\u00e9veloppement ad hoc en cours.<\/li>\n<\/ul>\n<p>[\/vc_column_text]<div class=\"clearboth\"><\/div><style>#thegem-divider-69ef17e2e4006 {margin-top: 40px !important;}<\/style><div id=\"thegem-divider-69ef17e2e4006\" class=\"gem-divider  divider-hidden\" style=\"\" ><\/div>[\/vc_column][\/vc_row][vc_row equal_height=&#8221;yes&#8221;][vc_column width=&#8221;1\/2&#8243;][vc_column_text]<\/p>\n<h5>CONTACT :<\/h5>\n<p>&nbsp;<\/p>\n<p><strong>H\u00f4pital Europ\u00e9en Georges Pompidou \u2013 HEGP<\/strong><\/p>\n<p>20 rue Leblanc \u2013 75015 Paris<\/p>\n<p>\u00c9quipe : Anita Burgun, Bastien Rance, Hector Countouris[\/vc_column_text][\/vc_column][vc_column width=&#8221;1\/2&#8243; css_animation=&#8221;fadeIn&#8221; css=&#8221;.vc_custom_1550402874611{padding-top: 0px !important;background-position: center !important;background-repeat: no-repeat !important;background-size: cover !important;}&#8221;][vc_single_image image=&#8221;31059&#8243; img_size=&#8221;full&#8221;][\/vc_column][\/vc_row]<\/p>\n<\/div>","protected":false},"excerpt":{"rendered":"<p>[vc_row equal_height=&#8221;yes&#8221;][vc_column][vc_column_text] Plateforme de bases de donn\u00e9es [\/vc_column_text][\/vc_column][\/vc_row][vc_row equal_height=&#8221;yes&#8221; css=&#8221;.vc_custom_1553263700649{margin-top: 20px&#8230;<\/p>\n","protected":false},"author":2,"featured_media":0,"parent":31210,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-31505","page","type-page","status-publish"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v22.7 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Recherche Translationnelle - Carpem<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Recherche Translationnelle - Carpem\" \/>\n<meta property=\"og:description\" content=\"[vc_row equal_height=&#8221;yes&#8221;][vc_column][vc_column_text] Plateforme de bases de donn\u00e9es [\/vc_column_text][\/vc_column][\/vc_row][vc_row equal_height=&#8221;yes&#8221; css=&#8221;.vc_custom_1553263700649{margin-top: 20px...\" \/>\n<meta property=\"og:url\" content=\"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/\" \/>\n<meta property=\"og:site_name\" content=\"Carpem\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"5 minutes\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/\",\"url\":\"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/\",\"name\":\"Recherche Translationnelle - Carpem\",\"isPartOf\":{\"@id\":\"https:\/\/carpem.stage.spacerdesign.com\/#website\"},\"datePublished\":\"2024-01-25T12:51:10+00:00\",\"dateModified\":\"2024-01-25T12:51:10+00:00\",\"breadcrumb\":{\"@id\":\"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/#breadcrumb\"},\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/\"]}]},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Portada\",\"item\":\"https:\/\/carpem.stage.spacerdesign.com\/en\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"Platforms\",\"item\":\"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/\"},{\"@type\":\"ListItem\",\"position\":3,\"name\":\"Recherche Translationnelle\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\/\/carpem.stage.spacerdesign.com\/#website\",\"url\":\"https:\/\/carpem.stage.spacerdesign.com\/\",\"name\":\"Carpem\",\"description\":\"\",\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\/\/carpem.stage.spacerdesign.com\/?s={search_term_string}\"},\"query-input\":\"required name=search_term_string\"}],\"inLanguage\":\"en-US\"}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"Recherche Translationnelle - Carpem","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/","og_locale":"en_US","og_type":"article","og_title":"Recherche Translationnelle - Carpem","og_description":"[vc_row equal_height=&#8221;yes&#8221;][vc_column][vc_column_text] Plateforme de bases de donn\u00e9es [\/vc_column_text][\/vc_column][\/vc_row][vc_row equal_height=&#8221;yes&#8221; css=&#8221;.vc_custom_1553263700649{margin-top: 20px...","og_url":"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/","og_site_name":"Carpem","twitter_card":"summary_large_image","twitter_misc":{"Est. reading time":"5 minutes"},"schema":{"@context":"https:\/\/schema.org","@graph":[{"@type":"WebPage","@id":"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/","url":"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/","name":"Recherche Translationnelle - Carpem","isPartOf":{"@id":"https:\/\/carpem.stage.spacerdesign.com\/#website"},"datePublished":"2024-01-25T12:51:10+00:00","dateModified":"2024-01-25T12:51:10+00:00","breadcrumb":{"@id":"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/#breadcrumb"},"inLanguage":"en-US","potentialAction":[{"@type":"ReadAction","target":["https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/"]}]},{"@type":"BreadcrumbList","@id":"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/recherche-translationnelle\/#breadcrumb","itemListElement":[{"@type":"ListItem","position":1,"name":"Portada","item":"https:\/\/carpem.stage.spacerdesign.com\/en\/"},{"@type":"ListItem","position":2,"name":"Platforms","item":"https:\/\/carpem.stage.spacerdesign.com\/les-plateformes\/"},{"@type":"ListItem","position":3,"name":"Recherche Translationnelle"}]},{"@type":"WebSite","@id":"https:\/\/carpem.stage.spacerdesign.com\/#website","url":"https:\/\/carpem.stage.spacerdesign.com\/","name":"Carpem","description":"","potentialAction":[{"@type":"SearchAction","target":{"@type":"EntryPoint","urlTemplate":"https:\/\/carpem.stage.spacerdesign.com\/?s={search_term_string}"},"query-input":"required name=search_term_string"}],"inLanguage":"en-US"}]}},"_links":{"self":[{"href":"https:\/\/carpem.stage.spacerdesign.com\/en\/wp-json\/wp\/v2\/pages\/31505","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/carpem.stage.spacerdesign.com\/en\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/carpem.stage.spacerdesign.com\/en\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/carpem.stage.spacerdesign.com\/en\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/carpem.stage.spacerdesign.com\/en\/wp-json\/wp\/v2\/comments?post=31505"}],"version-history":[{"count":1,"href":"https:\/\/carpem.stage.spacerdesign.com\/en\/wp-json\/wp\/v2\/pages\/31505\/revisions"}],"predecessor-version":[{"id":31506,"href":"https:\/\/carpem.stage.spacerdesign.com\/en\/wp-json\/wp\/v2\/pages\/31505\/revisions\/31506"}],"up":[{"embeddable":true,"href":"https:\/\/carpem.stage.spacerdesign.com\/en\/wp-json\/wp\/v2\/pages\/31210"}],"wp:attachment":[{"href":"https:\/\/carpem.stage.spacerdesign.com\/en\/wp-json\/wp\/v2\/media?parent=31505"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}